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Volume 39 Issue 5
May  2024
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Article Contents
GUO C N, LI J J, YANG J F, et al. Identification and Expressions of GRF Genes in Artemisia argyi [J]. Fujian Journal of Agricultural Sciences,2024,39(5):540−549 doi: 10.19303/j.issn.1008-0384.2024.05.005
Citation: GUO C N, LI J J, YANG J F, et al. Identification and Expressions of GRF Genes in Artemisia argyi [J]. Fujian Journal of Agricultural Sciences,2024,39(5):540−549 doi: 10.19303/j.issn.1008-0384.2024.05.005

Identification and Expressions of GRF Genes in Artemisia argyi

doi: 10.19303/j.issn.1008-0384.2024.05.005
  • Received Date: 2024-03-19
  • Rev Recd Date: 2024-04-16
  • Available Online: 2024-06-26
  • Publish Date: 2024-05-28
  •   Objective  Growth-regulating factor (GRF) genes in Artemisia argyi were identified and analyzed.   Method  Bioinformatic analysis on the physiochemical properties, structure, and evolution of the GRF genes, as well as their expressions in different tissues under stresses, of A. argyi was conducted using qRT-PCR.   Result  SeventeenAsGRFs were hydrophilic proteins in the phylogenetic evolutionary tree of 4 subfamilies. Those genes of same clade in the evolutionary tree contained a similar or same conserved motif. The members were randomly distributed on 11 chromosomes with promoters of multiple stress- and hormone-responsive elements and one that varied in the response to salinity. The tissue-specific expressions of the genes, including AaGRF05, AaGRF06, AaGRF11, andAaGRF14, peaked in 12h after being exposed to abscisic acid, indoacetic acid, salicylic acid, or methyl jasmonate.   Conclusion   The GRF genes associated with the growth and stress regulation of A. argyi were identified, and relevant bioinformatics obtained.
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  • [1]
    简梨娜, 宋学丽, 郭江涛, 等. 艾草的化学成分及临床应用 [J]. 化学工程师, 2021, 35(7):58−62.

    JIAN L N, SONG X L, GUO J T, et al. Chemical composition and clinical application of Artemisia argyi [J]. Chemical Engineer, 2021, 35(7): 58−62. (in Chinese)
    [2]
    李晓红. 蕲艾的采集储藏及药用价值的探讨 [J]. 中国医药指南, 2012, 10(27):615−616.

    LI X H. Discussion on the collection, storage and medicinal value of Artemisia argyi [J]. Guide of China Medicine, 2012, 10(27): 615−616. (in Chinese)
    [3]
    马超, 原佳乐, 张苏, 等. GRF转录因子对植物生长发育及胁迫响应调控的分子机制 [J]. 核农学报, 2017, 31(11):2145−2153. doi: 10.11869/j.issn.100-8551.2017.11.2145

    MA C, YUAN J L, ZHANG S, et al. The molecular mechanisms of growth-regulating factors (GRFs) in plant growth, development and stress response [J]. Journal of Nuclear Agricultural Sciences, 2017, 31(11): 2145−2153. (in Chinese) doi: 10.11869/j.issn.100-8551.2017.11.2145
    [4]
    邱玮茜, 王帅, 鞠青, 等. 鳗草GRF基因家族的鉴定与生物信息学分析 [J]. 浙江海洋大学学报(自然科学版), 2022, (1):31−37.

    QIU W Q, WANG S, JU Q, et al. Genome-wide identification and bioinformatics analysis of growth-regulating factor gamily in Zostera marina [J]. Journal of Zhejiang Ocean University (Natural Science), 2022(1): 31−37. (in Chinese)
    [5]
    CHOI D, KIM J H, KENDE H. Whole genome analysis of the OsGRF gene family encoding plant-specific putative transcription activators in rice (Oryza sativa L. ) [J]. Plant and Cell Physiology, 2004, 45(7): 897−904. doi: 10.1093/pcp/pch098
    [6]
    董晨, 郑雪文, 王弋, 等. 荔枝GRF基因家族的全基因组鉴定及表达分析 [J]. 热带生物学报, 2024, 15(2):190−197.

    DONG C, ZHENG X W, WANG Y, et al. Genome-wide identification and expression analysis of GRF gene family in Litchi [J]. Journal of Tropical Biology, 2024, 15(2): 190−197.
    [7]
    KHATUN K, ROBIN A H K, PARK J I, et al. Molecular characterization and expression profiling of tomato GRF transcription factor family genes in response to abiotic stresses and phytohormones [J]. International Journal of Molecular Sciences, 2017, 18(5): 1056. doi: 10.3390/ijms18051056
    [8]
    WANG P, XIAO Y, YAN M, et al. Whole-genome identification and expression profiling of growth-regulating factor (GRF) and GRF-interacting factor (GIF) gene families in Panax ginseng [J]. BMC Genomics, 2023, 24: 334. doi: 10.1186/s12864-023-09435-w
    [9]
    KUIJT S J H, GRECO R, AGALOU A, et al. Interaction between theGROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX Families of transcription factors [J]. Plant Physiology, 2014, 164(4): 1952−1966. doi: 10.1104/pp.113.222836
    [10]
    LI S C, GAO F Y, XIE K L, et al. The OsmiR396c-OsGRF4-OsGIF1 regulatory module determines grain size and yield in rice [J]. Plant Biotechnology Journal, 2016, 14(11): 2134−2146. doi: 10.1111/pbi.12569
    [11]
    LIAN C L, LAN J X, MA R, et al. Genome-wide analysis of aux/IAA gene family in Artemisia argyi: Identification, phylogenetic analysis, and determination of response to various phytohormones [J]. Plants, 2024, 13(5): 564. doi: 10.3390/plants13050564
    [12]
    易小哲, 邬兰, 向丽, 等. 艾Artemisia argyi实时荧光定量PCR内参基因筛选 [J]. 中国中药杂志, 2022, 8(3):659−667.

    YI X Z, WU L, XIANG L, et al. Screening of reference genes for quantitative real-time PCR in Artemisia argyi [J]. China Journal of Chinese Materia Medica, 2022, 8(3): 659−667. (in Chinese)
    [13]
    薛正刚, 王树杰, 杨永乾, 等. 大麦GRF家族的基因组鉴定及生物信息学分析 [J]. 分子植物育种, 2021, 19(6):1750−1757.

    XUE Z G, WANG S J, YANG Y Q, et al. Genome-wide identification and bioinformatics analysis of growth regulating factor(GRF)family in barley [J]. Molecular Plant Breeding, 2021, 19(6): 1750−1757. (in Chinese)
    [14]
    陈淑颖, 李一凡, 曾伟伟, 等. 圆齿野鸦椿YABBY基因家族鉴定及功能分析 [J]. 森林与环境学报, 2023, 43(3):303−310.

    CHEN S Y, LI Y F, ZENG W W, et al. Identification and functional analysis of the YABBY gene family in Euscaphis konishii [J]. Journal of Forest and Environment, 2023, 43(3): 303−310. (in Chinese)
    [15]
    SINGH K. Transcription factors in plant defense and stress responses [J]. Current Opinion in Plant Biology, 2002, 5(5): 430−436. doi: 10.1016/S1369-5266(02)00289-3
    [16]
    FENG K, HOU X L, XING G M, et al. Advances in AP2/ERF super-family transcription factors in plant [J]. Critical Reviews in Biotechnology, 2020, 40(6): 750−776. doi: 10.1080/07388551.2020.1768509
    [17]
    DU W X, YANG J F, LI Q, et al. Genome-wide identification and characterization of growth regulatory factor family genes in Medicago [J]. International Journal of Molecular Sciences, 2022, 23(13): 6905. doi: 10.3390/ijms23136905
    [18]
    WANG F D, QIU N W, DING Q, et al. Genome-wide identification and analysis of the growth-regulating factor family in Chinese cabbage (Brassica rapa L. ssp. pekinensis) [J]. BMC Genomics, 2014, 15(1): 807. doi: 10.1186/1471-2164-15-807
    [19]
    KIM J H, CHOI D, KENDE H. The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis [J]. The Plant Journal, 2003, 36(1): 94−104. doi: 10.1046/j.1365-313X.2003.01862.x
    [20]
    NOON J B, HEWEZI T, BAUM T J. Homeostasis in the soybean miRNA396–GRF network is essential for productive soybean cyst nematode infections [J]. Journal of Experimental Botany, 2019, 70(5): 1653−1668. doi: 10.1093/jxb/erz022
    [21]
    张立全, 张浩林, 李丛丛, 等. 谷子GRF基因家族鉴定与分析 [J]. 西南农业学报, 2021, 34(11):2340−2347.

    ZHANG L Q, ZHANG H L, LI C C, et al. Genome-wide analysis and identification of GRF gene family in foxtail millet (Setaria italica) [J]. Southwest China Journal of Agricultural Sciences, 2021, 34(11): 2340−2347. (in Chinese)
    [22]
    时丕彪, 何冰, 费月跃, 等. 藜麦GRF转录因子家族的鉴定及表达分析 [J]. 作物学报, 2019, 45(12):1841−1850.

    SHI P B, HE B, FEI Y Y, et al. Identification and expression analysis of GRF transcription factor family of Chenopodium quinoa [J]. Acta Agronomica Sinica, 2019, 45(12): 1841−1850. (in Chinese)
    [23]
    申孜, 闫小玲, 郝琴, 等. 毛竹PheMADS47a基因启动子克隆及功能分析[J]. 核农学报, 2024, 38(9): 1682−1690.

    SHEN Z, YAN X L, HAO Q, et al. Cloning and Functional Analysis of the Promoter of PheMADS47a Gene in Moso Bamboo (Phyllostachys edulis) [J]. Journal of Nuclear Agricultural Sciences, 2024, 38 (9): 1682−1690. (in Chinese)
    [24]
    HUANG W D, HE Y Q, YANG L, et al. Genome-wide analysis of growth-regulating factors (GRFs) in Triticum aestivum [J]. PeerJ, 2021, 9: e10701. doi: 10.7717/peerj.10701
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