Structure of <i>Uraria crinita</i> Chloroplast Genome

WU Minfu; LI Sha; GAO Roumin; WU MinHua; HUANG Qionglin

doi:10.19303/j.issn.1008-0384.2023.09.011

Volume 38 Issue 9

Sep. 2023

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WU M F, LI S, GAO R M, et al. Structure of Uraria crinita Chloroplast Genome [J]. Fujian Journal of Agricultural Sciences，2023，38（9）：1094−1102 doi: 10.19303/j.issn.1008-0384.2023.09.011

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WU M F, LI S, GAO R M, et al. Structure of Uraria crinita Chloroplast Genome [J]. Fujian Journal of Agricultural Sciences，2023，38（9）：1094−1102 doi: 10.19303/j.issn.1008-0384.2023.09.011

WU M F, LI S, GAO R M, et al. Structure of Uraria crinita Chloroplast Genome [J]. Fujian Journal of Agricultural Sciences，2023，38（9）：1094−1102 doi: 10.19303/j.issn.1008-0384.2023.09.011

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Structure of Uraria crinita Chloroplast Genome

doi: 10.19303/j.issn.1008-0384.2023.09.011

1.
Department of Food Science, Foshan Polytechnic College, Foshan, Guangdong　528137, China
2.
School of Basic Medicine, Guangdong Medical University, Zhanjiang, Guangdong 52023, China

Received Date: 2023-05-26
Rev Recd Date: 2023-07-04

Available Online: 2023-10-25

Publish Date: 2023-09-28

Abstract

Abstract

Objective Structure of the chloroplast genome from Uraria crinita, a plant used as food as well as herbal medicine in Lingnan area of China, was studied. Methods The whole chloroplast genome was obtained by high-throughput sequencing and then assembled, annotated, and analyzed by bioinformatic means. Results The genome was an annular quadripartite molecule of 149 774 bp that harbored 128 genes. It had a low GC content of 38.2% containing 26 015 codons that mostly ended with A or T. There were 110 loci of simple sequence repeat detected with the mononucleotide largely formed by A or T. An alignment and phylogenetic analysis on the sequence indicated a close relationship between U. crinita and U. lagopodioides. Conclusion The chloroplast genome and structure of U. crinita were unveiled for the first time to aid future studies on the cultivation, breeding, genetics, and utilization of the valuable plant.
- Uraria crinita,
- chloroplast genome,
- structure analysis,
- sequence alignment,
- phylogenetic relationship

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References(24)

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