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龙眼DlAGO4DlAGO6启动子的克隆及活性分析

陈荣珠 赖钟雄

陈荣珠,赖钟雄. 龙眼DlAGO4和DlAGO6启动子的克隆及活性分析 [J]. 福建农业学报,2023,38(5):552−558 doi: 10.19303/j.issn.1008-0384.2023.05.006
引用本文: 陈荣珠,赖钟雄. 龙眼DlAGO4DlAGO6启动子的克隆及活性分析 [J]. 福建农业学报,2023,38(5):552−558 doi: 10.19303/j.issn.1008-0384.2023.05.006
CHEN R Z, LAI Z X. Cloning and Activity of DlAGO4 and DlAGO6 Promoters from Dimocarpus longan [J]. Fujian Journal of Agricultural Sciences,2023,38(5):552−558 doi: 10.19303/j.issn.1008-0384.2023.05.006
Citation: CHEN R Z, LAI Z X. Cloning and Activity of DlAGO4 and DlAGO6 Promoters from Dimocarpus longan [J]. Fujian Journal of Agricultural Sciences,2023,38(5):552−558 doi: 10.19303/j.issn.1008-0384.2023.05.006

龙眼DlAGO4DlAGO6启动子的克隆及活性分析

doi: 10.19303/j.issn.1008-0384.2023.05.006
基金项目: 福建省(山区)作物遗传改良与创新利用重点实验室开放课题资助项目(2022SKF04);漳州卫生职业学院科技创新团队(Kjcx-5);国家自然科学基金项目(31572088)
详细信息
    作者简介:

    陈荣珠(1986−),博士,讲师,研究方向:中药资源及生物技术(E-mail:349074689@qq.com

    通讯作者:

    赖钟雄(1966−),博士,教授,主要从事园艺植物生物技术研究(E-mail:laizx01@163.com

  • 中图分类号: S667.2

Cloning and Activity of DlAGO4 and DlAGO6 Promoters from Dimocarpus longan

  • 摘要:   目的  Argonaute(AGO)蛋白是RNA介导的沉默复合物RISC的核心成分,参与植物生长发育、组织形成、细胞增殖凋亡、病毒防御、逆境响应等多种生物过程。探究龙眼DlAGO4DlAGO6基因启动子区域的顺式作用元件,以及重组表达载体在不同激素处理下的表达模式,可为进一步研究DlAGO4DlAGO6基因的功能提供参考。  方法  使用常规PCR技术克隆龙眼DlAGO4DlAGO6基因启动子序列,采用BPDG、PLACE和PlantCARE等生物信息学工具进行DlAGO4DlAGO6基因启动子序列的生物信息学分析,并构建全长启动子与GUS基因融合表达载体,转化烟草叶片,进行瞬时表达,通过GUS组织化学染色分析启动子的活性。  结果  DlAGO4基因启动子片段长度1514 bp,DlAGO6基因启动子片段长度1784 bp。两个启动子序列均含有TATA-box和CAAT-box核心元件、茉莉酸甲酯、脱落酸和光响应元件;DlAGO4启动子序列还含有水杨酸、赤霉素响应元件和厌氧应答调控元件;DlAGO6启动子序列还含有生长素及昼夜节律调控元件。2个启动子片段均可驱动GUS基因表达,表达强度弱于CaMV35S。MeJA和ABA处理可显著提高转DlAGO6启动子烟草叶片中GUS基因的相对表达水平,SA和MeJA处理可提高转DlAGO4启动子烟草叶片GUS基因的相对表达水平。  结论  成功克隆了龙眼DlAGO4DlAGO6基因启动子,二者为激素诱导型启动子,具有驱动下游GUS表达的活性,可能参与了植物体胚发育以及对激素的响应。
  • 图  1  龙眼DlAGO4、DlAGO6启动子克隆验证电泳图

    (1)1-- DlAGO4 基因5'端上游启动子序列;(2)2-- DlAGO6 基因5'端上游启动子序列;(3)M-DL 2 000 bp。

    Figure  1.  Electrophoretograms of DlAGO4 and DlAGO6 promoters

    (1)1: promoter of DlAGO4 ; (2)2: promoter of DlAGO6 ; (3)M-DL 2 000 bp .

    图  2  龙眼DlAGO4DlAGO6基因启动子序列功能元件分析

    Figure  2.  Cis-acting elements of DlAGO4 and DlAGO6 promoters

    图  3  烟草叶片GUS组织化学染色

    A:阴性对照;B:阳性对照;C:实验组(PDlAGO4::GUS载体);D:实验组(PDlAGO6::GUS载体)

    Figure  3.  GUS histochemical staining of tobacco leaves

    A: negative control; B: positive control; C: treatment group (PDlAGO4:GUS recombinant tobacco leaf); D: treatment group (PDlAGO6:GUS recombinant tobacco leaf).

    图  4  不同外源激素处理下瞬时转化烟草的GUS活性转录水平

    *表示0.05水平显著性差异

    Figure  4.  GUS transcriptional level of transformed tobacco under exogenous hormones treatments

    *indicates significant difference at P<0.05.

    表  1  引物序列

    Table  1.   Information on primer sequences

    引物名称
    Primer name
    引物序列(5′→3′)
    Primer sequence (5′→3′)
    退火温度
    Tm/℃
    pDlAGO4-FACGAGAAGAGGGAGGCAAGA59
    pDlAGO4-RAGACTGACACAACGCAGGAC
    pDlAGO6-FGTACACGCTCCAATTCAGACACG62
    pDlAGO6-RTGCTGCAATCATCAATGTTCAATA
    1300-pDlAGO4-FCAGTGGTCTCACGAGAAGAGGGAGGCAAGA58
    1300-pDlAGO4-RCAGTGGTCTCAGACTGACACAACGCAGGAC
    1300-pDlAGO6-FCAGTGGTCTCGTACACGCTCCAATTCAGACACG59
    1300-pDlAGO6-RCAGTGGTCTCTGCTGCAATCATCAATGTTCAATA
    加粗为保护碱基,下划线为Eco32I酶切位点
    Bold CAGT are protective bases;underlined GGTCTC are restriction sites of Eco32I .
    下载: 导出CSV
  • [1] CHEN Y K, XU X P, CHEN X H, et al. Seed-specific gene MOTHER of FT and TFL1(MFT) involved in embryogenesis, hormones and stress responses in Dimocarpus longan lour [J]. International Journal of Molecular Sciences, 2018, 19(8): 2403. doi: 10.3390/ijms19082403
    [2] BUTLER J E F, KADONAGA J T. The RNA polymerase II core promoter: A key component in the regulation of gene expression [J]. Genes & Development, 2002, 16(20): 2583−2592.
    [3] MALLORY A, VAUCHERET H. Form, function, and regulation of ARGONAUTE proteins [J]. The Plant Cell, 2012, 22(12): 3879−3889.
    [4] CAO J Y, XU Y P, ZHAO L, et al. Tight regulation of the interaction between Brassica napus and Sclerotinia sclerotiorum at the microRNA level [J]. Plant Molecular Biology, 2016, 92(1): 39−55.
    [5] GAN D F, ZHAN M D, YANG F, et al. Expression analysis of argonaute, Dicer-like, and RNA-dependent RNA polymerase genes in cucumber (Cucumis sativus L. ) in response to abiotic stress [J]. Journal of Genetics, 2017, 96(2): 235−249. doi: 10.1007/s12041-017-0758-y
    [6] KAPOOR M, ARORA R, LAMA T, et al. Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice [J]. BMC Genomics, 2008, 9: 451. doi: 10.1186/1471-2164-9-451
    [7] SHAO F J, LU S F. Genome-wide identification, molecular cloning, expression profiling and posttranscriptional regulation analysis of the Argonaute gene family in Salvia miltiorrhiza, an emerging model medicinal plant [J]. BMC Genomics, 2013, 14: 512. doi: 10.1186/1471-2164-14-512
    [8] QIN L, MO N, MUHAMMAD T, et al. Genome-wide analysis of DCL, AGO, and RDR gene families in pepper (Capsicum annuum L. ) [J]. International Journal of Molecular Sciences, 2018, 19(4): 1038. doi: 10.3390/ijms19041038
    [9] ZHAO H L, ZHAO K, WANG J, et al. Comprehensive analysis of dicer-like, argonaute, and RNA-dependent RNA polymerase gene families in grapevine (Vitis vinifera) [J]. Journal of Plant Growth Regulation, 2015, 34(1): 108−121. doi: 10.1007/s00344-014-9448-7
    [10] AGUSTÍN S, LUCAS D, ABELARDO V, et al. Genome-wide analysis of AGO, DCL and RDR gene families reveals RNA-directed DNA methylation is involved in fruit abscission in Citrus sinensis [J]. BMC Plant Biology, 2019, 19(1): 401. doi: 10.1186/s12870-019-1998-1
    [11] BAI M, YANG G S, CHEN W T, et al. Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum [J]. Gene, 2012, 501(1): 52−62. doi: 10.1016/j.gene.2012.02.009
    [12] ZHAO X, ZHENG W H, ZHONG Z H, et al. Genome-wide analysis of RNA-interference pathway in Brassica napus, and the expression profile of BnAGOs in response to Sclerotinia sclerotiorum infection [J]. European Journal of Plant Pathology, 2016, 146(3): 565−579. doi: 10.1007/s10658-016-0942-6
    [13] 赵丽, 夏文强, 蔡新忠. 拟南芥AGO2的亚细胞定位分析 [J]. 浙江大学学报(农业与生命科学版), 2013, 39(1):1−10.

    ZHAO L, XIA W Q, CAI X Z. Identification of subcellular localization of Arabidopsis AGO2 [J]. Journal of Zhejiang University (Agriculture and Life Sciences), 2013, 39(1): 1−10.(in Chinese)
    [14] 叶瑞强. 拟南芥AGO4/siRNA复合体细胞质内组装和不依赖DCL的小RNA介导DNA甲基化的机理研究[D]. 杭州: 浙江大学, 2014.

    YE R Q. Cytoplasmic assembly of AGO4/siRNA complexes and DNA methylation guided by DCL-independent sRNAs in Arabidopsis[D]. Hangzhou: Zhejiang University, 2014. (in Chinese)
    [15] HERNÁNDEZ-LAGANA E, RODRÍGUEZ-LEAL D, LÚA J, et al. A multigenic network of ARGONAUTE4 clade members controls early megaspore formation in Arabidopsis [J]. Genetics, 2016, 204(3): 1045−1056. doi: 10.1534/genetics.116.188151
    [16] MCCUE A D, PANDA K, NUTHIKATTU S, et al. ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation [J]. The EMBO Journal, 2015, 34(1): 20−35. doi: 10.15252/embj.201489499
    [17] LIN Y L, MIN J M, LAI R L, et al. Genome-wide sequencing of Longan (Dimocarpus longan Lour. ) provides insights into molecular basis of its polyphenol-rich characteristics [J]. GigaScience, 2017, 6(5): gix023.
    [18] CHEN R Z, SHEN X, ZHANG S T, et al. Genome-wide identification and expression analysis of Argonaute gene family from Longan embryogenic callus [J]. Journal of Integrative Agriculture, 2021, 20(8): 2138−2155. doi: 10.1016/S2095-3119(20)63313-5
    [19] 陈荣珠, 申序, 林美珍, 等. 龙眼体胚发生过程中DlAGO4基因的克隆及表达分析 [J]. 西北植物学报, 2020, 40(5):747−755.

    CHEN R Z, SHEN X, LIN M Z, et al. Cloning and expression analysis of DlAGO4 gene from embryogenic callus in Dimocarpus longan lour [J]. Acta Botanica Boreali-Occidentalia Sinica, 2020, 40(5): 747−755.(in Chinese)
    [20] 田奇琳. 龙眼胚性培养物DlRan3A和DlRan3B基因的功能分析[D]. 福州: 福建农林大学, 2017.

    TIAN Q L. Characterization of DlRan3A and DlRan3B gene from embryogenic cultures in Dimocarpus longan lour[D]. Fuzhou: Fujian Agriculture and Forestry University, 2017. (in Chinese)
    [21] 曾丽兰. 龙眼胚性愈伤组织SOD的表达分析及启动子功能鉴定[D]. 福州: 福建农林大学, 2013.

    ZENG L L. Characterization of SOD promoters and expression analysis of SOD genes of the embryogenic callus in Dimocarpus longan lour[D]. Fuzhou: Fujian Agriculture and Forestry University, 2013. (in Chinese)
    [22] 李豆, 苏功博, 胡晓晴, 等. 白桦BpSPL6基因启动子的克隆及表达分析 [J]. 北京林业大学学报, 2022, 44(2):1−10. doi: 10.12171/j.1000-1522.20200174

    LI D, SU G B, HU X Q, et al. Cloning and expression analysis of BpSPL6 promoter from Betula platyphylla [J]. Journal of Beijing Forestry University, 2022, 44(2): 1−10.(in Chinese) doi: 10.12171/j.1000-1522.20200174
    [23] 魏灵敏, 温少莹, 马际凯, 等. 北美鹅掌楸LtAGO1基因的克隆、表达及其启动子分析 [J]. 广西植物, 2022, 42(8):1402−1416. doi: 10.11931/guihaia.gxzw202102030

    WEI L M, WEN S Y, MA J K, et al. Cloning, expression and promoter analysis of LtAGO1 from Liriodendron tulipifera [J]. Guihaia, 2022, 42(8): 1402−1416.(in Chinese) doi: 10.11931/guihaia.gxzw202102030
    [24] 陈荣珠, 王小平, 申序, 等. 龙眼DlAGO1基因启动子的克隆与表达 [J]. 应用与环境生物学报, 2022, 28(2):485−490.

    CHEN R Z, WANG X P, SHEN X, et al. Cloning and expression analysis of Dl AGO1 promoter in Dimocarpus longan [J]. Chinese Journal of Applied and Environmental Biology, 2022, 28(2): 485−490.(in Chinese)
    [25] 陈晓慧, 曾丽兰, 徐小萍, 等. 龙眼Mn-SOD基因的表达及其启动子功能分析 [J]. 热带作物学报, 2018, 39(5):913−919.

    CHEN X H, ZENG L L, XU X P, et al. Expression of Mn-SOD and functional analysis of its promoter in Dimocarpus longan lour [J]. Chinese Journal of Tropical Crops, 2018, 39(5): 913−919.(in Chinese)
    [26] 田奇琳, 林玉玲, 赖钟雄, 等. 龙眼胚性愈伤组织DlRan3A和DlRan3B基因启动子的克隆及其生物信息学分析 [J]. 热带作物学报, 2014, 35(1):82−89.

    TIAN Q L, LIN Y L, LAI Z X, et al. Cloning and bioinformatic analysis of the promoters of DlRan3A and DlRan3B from embryogenic callus in Dimocarpus longan [J]. Chinese Journal of Tropical Crops, 2014, 35(1): 82−89.(in Chinese)
    [27] BOHMERT K. AGO1 defines a novel locus of Arabidopsis controlling leaf development [J]. The EMBO Journal, 1998, 17(1): 170−180. doi: 10.1093/emboj/17.1.170
    [28] LIU C, XIN Y, XU L, et al. Arabidopsis ARGONAUTE 1 binds chromatin to promote gene transcription in response to hormones and stresses [J]. Developmental Cell, 2018, 44(3): 348−361.e7. doi: 10.1016/j.devcel.2017.12.002
    [29] YANG Y, ZHONG J, OUYANG Y D, et al. The integrative expression and co-expression analysis of the AGO gene family in rice [J]. Gene, 2013, 528(2): 221−235. doi: 10.1016/j.gene.2013.07.002
    [30] 黄伦增, 许云泓, 孟凡文, 等. 杨树PtTST3基因启动子克隆及表达活性分析 [J]. 分子植物育种, 2022, 20(17):5649−5657.

    HUANG L Z, XU Y H, MENG F W, et al. Cloning and expression activity analysis of PtTST3 gene promoter in poplar [J]. Molecular Plant Breeding, 2022, 20(17): 5649−5657.(in Chinese)
    [31] 谢牧洪, 李文凯, 张昭龙, 等. 核桃JrTT1-1启动子不同长度片段响应干旱的活性分析 [J]. 北京林业大学学报, 2022, 44(8):31−38.

    XIE M H, LI W K, ZHANG Z L, et al. Activity analysis of different length fragments of walnut JrTT1-1 promoter in response to drought stress [J]. Journal of Beijing Forestry University, 2022, 44(8): 31−38.(in Chinese)
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  • 收稿日期:  2023-02-01
  • 录用日期:  2023-05-11
  • 修回日期:  2023-04-30
  • 网络出版日期:  2023-07-06
  • 刊出日期:  2023-05-28

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