Genome-wide Identification and Expressions of Banana GDSL Lipase Gene Family
-
摘要:
目的 揭示香蕉GDSL脂肪酶基因家族(MaGDSL)序列特征及其在香蕉生长发育过程中的潜在功能。 方法 利用生物信息学方法对MaGDSL进行全基因组鉴定,分析其染色体、启动子顺式作用元件和转录因子结合位点(TFBS)的分布情况以及编码蛋白的理化性质、基因结构、保守基序和系统进化关系,并基于转录组数据库分析MaGDSLs在高温(45 ℃)/低温 (4 ℃)处理的叶片、枯萎病菌 FocTR4侵染的根系以及自然成熟/乙烯催熟的不同成熟阶段的果实中的表达模式,同时利用实时荧光定量PCR(qRT-PCR)分析部分MaGDSL成员在花粉中的表达情况。 结果 香蕉A基因组中有76个MaGDSL成员,分布于11个染色体上,可分为9个亚家族,各成员编码区长度为1014~ 2193 bp,其中有5个成员含有不同数量的转录本;多数MaGDSL成员包含5个外显子和4个内含子,编码蛋白具有信号肽且主要定位在内外膜上;启动子区存在多种植物激素和逆境胁迫相关响应元件以及22种TFBSs;MaGDSLs中有3个串联重复基因簇位于4、8号染色体,6个串联重复基因对分别位于1、6、7、8、9和10号染色体上,22对片段重复基因分布在除11号染色体外的所有染色体上。MaGDSLs在香蕉叶片和根部的表达水平差异较大,且个别成员受高、低温胁迫以及枯萎病菌调控,其中5个成员(MaGDSL4-5、8-1、8-12、9-4、9-5)受高、低温胁迫抑制表达,而MaGDSL2-1和MaGDSL6-8受高、低温胁迫诱导表达,MaGDSL4-1和MaGDSL11-1受低温和FocTR4调控,MaGDSL5~8仅响应低温胁迫,其中MaGDSL2-2和MaGLP10-5对各种处理均有响应,而MaGDSL1-1在根系和花粉中均有高表达。 结论 MaGDSLs可能在香蕉生长发育过程中发挥重要作用,同时部分成员特异响应生物和非生物胁迫。 Abstract:Objective Sequences and functions of banana GDSL lipase gene family (MaGDSL) were studied. Methods Bioinformatics was applied to identify the genomes, analyze the distributions of chromosomes, promoter cis-acting elements, and transcription factor binding sites (TFBS), and determine the physicochemical properties, gene structure, conserved motifs, and phylogenetic relationships of the encoded proteins of the MaGDSL family. Based on the transcriptome database, the expressions of MaGDSLs in the high (45 ℃)- or low temperature (4 ℃)-treated leaves, FocTR4-infested roots, and the natural or ethylene ripened fruits were measured. And qRT-PCR was employed to obtain the expressions of MaGDSL members in pollen. Results The banana A genome had 76 MaGDSLs of 9 subfamilies distributed on 11 chromosomes. The coding region of each member was 1014–2193 bp. Five of the members contained varied number of transcripts, but most of them had 5 exons and 4 introns. The encoded proteins had signal peptides localized mainly in the inner and outer membranes. The MaGDSLs had 3 tandem repeat clusters on chromosomes 4 and 8, 6 tandem repeat pairs on chromosomes 1, 6, 7, 8, 9, and 10, and 22 fragment repeat pairs on all except chromosome 11. The expressions of MaGDSLs in banana leaves and roots were highly variable with individual members regulated by high and low temperature stresses as well as the blast fungus. Five members (i.e., MaGDSL4-5, 8-1, 8-12, 9-4, 9-5) were repressed, but MaGDSL2-1 and MaGDSL6-8 induced, by high- or low-temperature exposure, while MaGDSL4-1 and MaGDSL11-1 regulated by low temperature and FocTR4, MaGDSL5–8 responded only to low temperature, MaGDSL2-2 and MaGLP10-5 sensitive to various treatments, and MaGDSL1-1 highly expressed in the roots and pollens. Conclusion MaGDSLs might play an important role in the growth and development of banana plants. Some of the members responded specifically to certain biotic and/or abiotic stresses. -
Key words:
- Banana /
- GDSL lipase gene /
- genome /
- stress by adversity /
- expression analysis
-
表 1 qPCR 分析引物
Table 1. Primers for qRT-PCR
基因名称
Gene ID引物名称
Primer name引物序列
Primer sequence内参UBQ F 3′-GGCACCACAAACAACACAGG-5′ R 3′-AGACGAGCAAGGCTTCCATT-5′ MaGDSL2-7 F 3′-GGAAGACGGGAGAGGGATAC-5′ R 3′-GCCTACGTTCATGGGGTAAGC-5′ MaGDSL3-2 F 3′-ATCTTCGGAGACTCCCTCGT-5′ R 3′-GTGCTTGCCCTCTTGTGTTT-5′ MaGDSL5-1 F 3′-TTGATGCAGCAACAGTGACA-5′ R 3′-AAACATAGCAGGCACCGACT-5′ MaGDSL6-4 F 3′-GAGCTGAGAAGGACGATGCT-5′ R 3′-GTCAAGCCATTGGTGAACCT-5′ MaGDSL6-7 F 3′-CCCAATGGCAACAAGTATCC-5′ R 3′-CCTGAGGGGCTACATACCAA-5′ MaGDSL6-9 F 3′-TTGCCAGGCTCTTTCTTTGT-5′ R 3′-AGCACTTGTCAGCGATGATG-5′ MaGDSL7-5 F 3′-TGAGGGCTCCATGGACATA-5′ R 3′-GCAAGTTCACGGGATAGCA-5′ MaGDSL8-10 F 3′-CGGAACCACAGGACGATACT-5′ R 3′-TGTCCCAAAGGATTCCAGAG-5′ MaGDSL9-2 F 3′-ATGAACTCAACGCCTTGGAC-5′ R 3′-GATGAGGACGATTGCAGCTT-5′ MaGDSL11-6 F 3′-TGCTTCCCATGCTATCGAG-5′ R 3′-CCCAAATGGTCTGCAACAG-5′ MaGDSL1-1 F 3′-CGTTGTGATTCTGTGCTGCT-5′ R 3′-GTTTCTCAGCGAGGAAGTCG-5′ 表 2 MaGDSL家族成员基本信息和编码蛋白理化性质
Table 2. Information and physiochemical properties of MaGDSL encoded proteins
基因 ID
Gene ID染色体位置
Chromosome
location基因
Gene长度
Length/aa等电点
pI不稳定指数
Instability index亲水性
GRAVY信号肽
Signal
peptide跨膜结构
Transmembrane
domain亚细胞定位
Protein subcellular
localization
PredictionMa01_g03770 chr01:2506772..2513988(−) MaGDSL1-1 362 5.97 40.6 −0.118 是 0 外膜 Outer membrane Ma01_g03780 chr01:2514735..2517040(+) MaGDSL1-2 363 5.58 36.14 −0.064 是 0 胞外 Extracellular Ma01_g04800 chr01:3286719..3288349(−) MaGDSL1-3 363 6.90 39.64 0.034 是 1 外膜 Outer membrane Ma01_g17620 chr01:12898520..12900562(+) MaGDSL1-4 390 6.25 42.89 −0.045 是 0 外膜 Outer membrane Ma02_g12980 chr02:21545341..21546931(+) MaGDSL2-1 355 6.52 32.18 0.092 是 1 周质 Periplasmic Ma02_g13020 chr02:21592310..21594060(+) MaGDSL2-2 355 6.22 33.06 0.084 是 1 外膜 Outer membrane Ma02_g13050 chr02:21608508..21610184(+) MaGDSL2-3 353 6.99 28.54 0.041 是 1 外膜 Outer membrane Ma02_g13620 chr02:21929576..21940378(+) MaGDSL2-4 430 8.05 36.67 −0.026 是 1 外膜 Outer membrane Ma02_g14360 chr02:22465764..22467578(−) MaGDSL2-5a 401 5.25 33.59 0.210 否 0 外膜 Outer membrane MaGDSL2-5b 396 5.24 35.01 0.211 否 0 外膜 Outer membrane Ma02_g18570 chr02:25021259..25022978(−) MaGDSL2-6 358 6.23 22.58 0.000 是 0 外膜 Outer membrane Ma02_g21270 chr02:26951434..26952967(+) MaGDSL2-7 376 9.21 36.69 −0.090 是 0 外膜 Outer membrane Ma03_g03330 chr03:2232832..2235731(−) MaGDSL3-1 419 7.16 32.55 −0.113 否 0 周质 Periplasmic Ma03_g16970 chr03:22263933..22266432(+) MaGDSL3-2 366 5.97 35.88 −0.135 是 0 外膜 Outer membrane Ma03_g25700 chr03:29665153..29668011(+) MaGDSL3-3a 372 5.79 45.25 0.097 是 0 外膜 Outer membrane MaGDSL3-3b 364 5.90 47.02 0.081 是 0 周质 Periplasmic Ma03_g26380 chr03:30141639..30143572(−) MaGDSL3-4 410 6.35 40.42 −0.079 是 0 外膜 Outer membrane Ma04_g05070 chr04:3833650..3836264(−) MaGDSL4-1 356 8.59 34.73 0.044 是 0 胞外 Extracellular Ma04_g18170 chr04:19831827..19833593(−) MaGDSL4-2 347 6.64 27.42 0.090 是 0 外膜 Outer membrane Ma04_g19770 chr04:22407980..22409457(+) MaGDSL4-3 373 6.09 37.18 0.008 是 0 外膜 Outer membrane Ma04_g32080 chr04:32208763..32212100(+) MaGDSL4-4 363 8.25 22.57 0.243 是 0 外膜 Outer membrane Ma04_g32090 chr04:32217091..32219380(+) MaGDSL4-5 367 5.13 32.77 0.094 是 0 外膜 Outer membrane Ma04_g32250 chr04:32308311..32310571(+) MaGDSL4-6 362 8.54 22.38 0.167 是 0 外膜 Outer membrane Ma04_g32390 chr04:32366386..32368477(−) MaGDSL4-7 364 9.47 37.07 −0.018 是 0 外膜 Outer membrane Ma04_g35750 chr04:34368316..34369739(−) MaGDSL4-8 365 5.27 43.48 0.075 是 0 细胞质 Cytoplasmic Ma04_g37620 chr04:35437527..35439771(+) MaGDSL4-9a 358 8.75 37.23 0.019 是 0 外膜 Outer membrane MaGDSL4-9b 358 8.75 37.23 0.019 是 0 外膜 Outer membrane Ma05_g01340 chr05:780195..783192(−) MaGDSL5-1 413 5.28 20.21 −0.015 是 0 胞外 Extracellular Ma05_g10980 chr05:7975525..7978280(+) MaGDSL5-2 355 6.03 40.10 −0.082 是 0 外膜 Outer membrane Ma05_g14230 chr05:10339954..10341215(+) MaGDSL5-3 361 5.35 37.32 −0.055 是 0 细胞 Cytoplasmic Ma05_g15830 chr05:12426846..12430706(+) MaGDSL5-4 375 9.05 39.01 −0.130 是 1 胞外 Extracellular Ma05_g17280 chr05:19801910..19803428(−) MaGDSL5-5 366 6.12 38.93 −0.015 是 1 外膜 Outer membrane Ma05_g17650 chr05:21042672..21044837(+) MaGDSL5-6 386 8.71 36.61 −0.085 是 0 周质 Periplasmic Ma05_g23460 chr05:35527091..35528767(−) MaGDSL5-7 374 6.75 35.27 −0.146 是 1 外膜 Outer membrane Ma05_g23660 chr05:35833232..35837552(+) MaGDSL5-8 377 5.49 43.04 −0.016 是 0 外膜 Outer membrane Ma06_g04310 chr06:3104879..3106481(−) MaGDSL6-1a 372 5.40 31.37 −0.102 是 0 外膜 Outer membrane MaGDSL6-1b 338 5.52 30.79 0.033 是 0 外膜 Outer membrane Ma06_g24960 chr06:25117515..25118735(−) MaGDSL6-2 355 6.79 34.76 0.092 是 1 内膜 Inner membrane Ma06_g25030 chr06:25237635..25243333(−) MaGDSL6-3 380 8.23 37.33 0.008 是 0 周质 Periplasmic Ma06_g27800 chr06:29688900..29691154(−) MaGDSL6-4 365 5.20 42.08 −0.121 是 0 外膜 Outer membrane Ma06_g29860 chr06:31225349..31227058(−) MaGDSL6-5 411 7.56 34.71 −0.013 否 0 周质 Periplasmic Ma06_g30580 chr06:31830895..31832818(+) MaGDSL6-6a 375 8.97 43.59 0.022 是 0 周质 Periplasmic MaGDSL6-6b 374 8.86 43.71 0.032 是 0 周质 Periplasmic Ma06_g30640 chr06:31860762..31862418(−) MaGDSL6-7 447 9.21 31.85 −0.149 否 0 外膜 Outer membrane Ma06_g37580 chr06:36585560..36587436(−) MaGDSL6-8 398 5.94 41.69 −0.055 否 1 胞外 Extracellular Ma06_g38100 chr06:36975407..36978177(+) MaGDSL6-9 365 6.50 42.06 0.061 是 0 内膜 Inner membrane Ma07_g08760 chr07:6557127..6558543(+) MaGDSL7-1 359 7.59 24.74 −0.001 是 0 外膜 Outer membrane Ma07_g12320 chr07:9208788..9210632(+) MaGDSL7-2 389 6.06 30.74 0.000 否 1 外膜 Outer membrane Ma07_g13910 chr07:10418714..10420475(+) MaGDSL7-3 360 8.08 31.58 0.016 是 0 内膜 Inner membrane Ma07_g13920 chr07:10420620..10422694(+) MaGDSL7-4 365 9.53 42.01 −0.077 是 0 外膜 Outer membrane Ma07_g14440 chr07:10888114..10890751(+) MaGDSL7-5 363 5.12 49.96 −0.009 否 0 外膜 Outer membrane Ma08_g06100 chr08:4121189..4123492(−) MaGDSL8-1 371 8.55 37.99 −0.007 是 0 周质 Periplasmic Ma08_g09750 chr08:7078632..7081137(+) MaGDSL8-2 366 6.60 31.02 0.054 是 0 外膜 Outer membrane Ma08_g10150 chr08:7392254..7396118(−) MaGDSL8-3 381 6.65 33.87 −0.001 是 0 外膜 Outer membrane Ma08_g10160 chr08:7397273..7398935(−) MaGDSL8-4 404 6.54 37.62 −0.101 否 0 周质 Periplasmic Ma08_g10170 chr08:7404987..7406648(−) MaGDSL8-5 367 6.26 39.19 −0.081 是 0 外膜 Outer membrane Ma08_g10480 chr08:7659127..7660505(+) MaGDSL8-6 376 5.36 23.81 0.106 是 1 外膜 Outer membrane Ma08_g21060 chr08:35064951..35067710(+) MaGDSL8-7 359 6.88 31.43 −0.068 是 0 内膜 Inner membrane Ma08_g21070 chr08:35068690..35077978(+) MaGDSL8-8 731 8.61 38.45 0.113 是 0 外膜 Outer membrane Ma08_g28640 chr08:40487336..40489392(−) MaGDSL8-9 384 5.02 45.15 −0.050 是 1 胞外 Extracellular Ma08_g30430 chr08:41700756..41702316(+) MaGDSL8-10 397 6.70 39.81 0.115 是 0 内膜 Inner membrane Ma08_g30470 chr08:41727515..41729409(+) MaGDSL8-11 356 5.16 31.84 0.142 是 0 细胞外 Extracellular Ma08_g30480 chr08:41730080..41733085(+) MaGDSL8-12 383 4.54 39.03 0.116 是 1 外膜 Outer membrane Ma09_g01870 chr09:1401507..1405717(+) MaGDSL9-1 381 7.11 35.50 −0.111 是 0 周质 Periplasmic Ma09_g05540 chr09:3558484..3560119(−) MaGDSL9-2 369 6.89 33.29 −0.049 是 0 外膜 Outer membrane Ma09_g19240 chr09:21599052..21600910(−) MaGDSL9-3 365 4.94 42.59 0.050 是 1 内膜 Inner membrane Ma09_g24520 chr09:36179911..36182176(+) MaGDSL9-4 360 7.61 35.81 0.074 是 1 胞外 Extracellular Ma09_g24530 chr09:36193365..36196041(+) MaGDSL9-5 360 8.73 35.21 0.077 是 0 胞外 Extracellular Ma10_g12640 chr10:25677743..25681254(+) MaGDSL10-1 381 6.16 38.28 0.108 是 1 周质 Periplasmic Ma10_g14470 chr10:26912910..26916293(+) MaGDSL10-2 360 6.59 28.16 −1.019 是 0 外膜 Outer membrane Ma10_g14480 chr10:26917998..26919683(−) MaGDSL10-3 370 7.98 42.03 0.025 是 0 周质 Periplasmic Ma10_g14730 chr10:27073351..27075394(+) MaGDSL10-4 393 7.63 39.37 0.040 是 0 周质 Periplasmic Ma10_g21620 chr10:31338004..31344227(+) MaGDSL10-5 359 7.23 33.11 0.023 是 0 内膜 Inner membrane Ma11_g05100 chr11:3940477..3942390(+) MaGDSL11-1 374 5.36 34.01 0.059 是 0 外膜 Outer membrane Ma11_g09200 chr11:7355875..7357479(−) MaGDSL11-2 374 5.28 34.44 0.075 是 0 周质 Periplasmic Ma11_g10620 chr11:10119577..10121852(−) MaGDSL11-3 366 8.87 34.88 −0.042 是 0 胞外 Extracellular Ma11_g14690 chr11:20398154..20399698(+) MaGDSL11-4 368 7.50 37.23 −0.133 是 0 外膜 Outer membrane Ma11_g15240 chr11:20938047..20940295(−) MaGDSL11-5 360 6.01 37.08 0.070 是 0 外膜 Outer membrane Ma11_g16030 chr11:21634731..21637078(−) MaGDSL11-6 361 5.49 32.42 −0.033 是 0 胞外 Extracellular Ma11_g18800 chr11:23822530..23824109(+) MaGDSL11-7 367 5.34 28.72 −0.015 是 1 外膜 Outer membrane Ma11_g25050 chr11:27802837..27804653(+) MaGDSL11-8 386 6.49 31.58 −0.006 是 1 周质 Periplasmic 跨膜结构中,0代表不存在跨膜结构,1代表存在跨膜结构。
In the table, 0 means no transmembrane domain existed, 1 transmembrane domain existed.表 3 MaGDSLs同源基因 Ka/Ks 分析
Table 3. Ka/Ks analysis of MaGDSLs homologous genes
复制类型
Duplication type基因名称
Gene name基因ID
Gene ID基因名称
Gene name基因ID
Gene IDKa Ks Ka/Ks 串联重复
Tandem duplicationMaGDSL1-1 Ma01_g03770 MaGDSL1-2 Ma01_g03780 0.0567 0.1592 0.3562 MaGDSL4-4 Ma04_g32080 MaGDSL4-5 Ma04_g32090 0.3667 1.5348 0.2389 MaGDSL4-6 Ma04_g32250 MaGDSL4-7 Ma04_g32390 0.7590 2.1143 0.3590 MaGDSL6-6 Ma06_g30580 MaGDSL6-7 Ma06_g30640 0.9792 1.6565 0.5911 MaGDSL7-3 Ma07_g13910 MaGDSL7-4 Ma07_g13920 0.3650 1.2292 0.2969 MaGDSL8-3 Ma08_g10150 MaGDSL8-4 Ma08_g10160 0.4687 1.4135 0.3316 MaGDSL8-4 Ma08_g10160 MaGDSL8-5 Ma08_g10170 0.0355 0.0230 1.5416 MaGDSL8-7 Ma08_g21060 MaGDSL8-8 Ma08_g21070 0.2879 1.1093 0.2596 MaGDSL8-10 Ma08_g30430 MaGDSL8-11 Ma08_g30470 0.8306 —— —— MaGDSL8-11 Ma08_g30470 MaGDSL8-12 Ma08_g30480 0.4536 1.4482 0.3132 MaGDSL9-4 Ma09_g24520 MaGDSL9-5 Ma09_g24530 0.0225 0.0303 0.7449 MaGDSL10-2 Ma10_g14470 MaGDSL10-3 Ma10_g14480 0.4506 1.3564 0.3322 片段复制
Segmental duplicationMaGDSL1-3 Ma01_g04800 MaGDSL5-5 Ma05_g17280 0.0963 0.7646 0.1259 MaGDSL2-4 Ma02_g13620 MaGDSL4-8 Ma04_g35750 0.1904 0.7111 0.2678 MaGDSL2-6 Ma02_g18570 MaGDSL7-1 Ma07_g08760 0.1022 0.5938 0.1721 MaGDSL3-3 Ma03_g25700 MaGDSL8-1 Ma08_g06100 0.1140 0.5042 0.2262 MaGDSL3-2 Ma03_g16970 MaGDSL9-2 Ma09_g05540 0.1436 0.7192 0.1997 MaGDSL3-1 Ma03_g03330 MaGDSL10-2 Ma10_g14470 0.1048 0.5944 0.1764 MaGDSL4-4 Ma04_g32080 MaGDSL5-2 Ma05_g10980 0.3694 2.3606 0.1565 MaGDSL4-1 Ma04_g05070 MaGDSL9-4 Ma09_g24520 0.1954 0.6881 0.2840 MaGDSL5-8 Ma05_g23660 MaGDSL8-3 Ma08_g10150 0.1251 0.4943 0.2531 MaGDSL5-6 Ma05_g17650 MaGDSL9-1 Ma09_g01870 0.1104 0.6648 0.1661 MaGDSL5-8 Ma05_g23660 MaGDSL11-1 Ma11_g05100 0.4539 1.8844 0.2409 MaGDSL6-4 Ma06_g27800 MaGDSL9-2 Ma09_g05540 0.0962 0.5062 0.1901 MaGDSL7-3 Ma07_g13910 MaGDSL8-7 Ma08_g21060 0.1133 0.4296 0.2638 MaGDSL7-4 Ma07_g13920 MaGDSL8-8 Ma08_g21070 0.2226 1.3169 0.1691 MaGDSL7-3 Ma07_g13910 MaGDSL10-5 Ma10_g21620 0.0939 0.4276 0.2196 MaGDSL7-3 Ma07_g13910 MaGDSL10-2 Ma10_g14470 0.2573 1.1430 0.2251 MaGDSL7-4 Ma07_g13920 MaGDSL10-3 Ma10_g14480 0.4068 1.3864 0.2934 MaGDSL8-7 Ma08_g21060 MaGDSL10-5 Ma10_g21620 0.0923 0.5003 0.1846 MaGDSL8-2 Ma08_g09750 MaGDSL11-7 Ma11_g18800 0.1081 0.7247 0.1491 MaGDSL8-4 Ma08_g10160 MaGDSL11-1 Ma11_g05100 0.3611 1.0690 0.3378 MaGDSL8-11 Ma08_g30470 MaGDSL11-3 Ma11_g10620 0.2212 0.5409 0.4090 MaGDSL10-2 Ma10_g14470 MaGDSL10-5 Ma10_g21620 0.2361 0.9899 0.2385 -
[1] ARPIGNY J L, JAEGER K E. Bacterial lipolytic enzymes: Classification and properties[J]. The Biochemical Journal, 1999, 343(Pt 1): 177-183. [2] MØLGAARD A, KAUPPINEN S, LARSEN S. Rhamnogalacturonan acetylesterase elucidates the structure and function of a new family of hydrolases [J]. Structure, 2000, 8(4): 373−383. doi: 10.1016/S0969-2126(00)00118-0 [3] UPTON C, BUCKLEY J T. A new family of lipolytic enzymes? [J]. Trends in Biochemical Sciences, 1995, 20(5): 178−179.[PubMed doi: 10.1016/S0968-0004(00)89002-7 [4] DING L N, LI M, WANG W J, et al. Advances in plant GDSL lipases: from sequences to functional mechanisms [J]. Acta Physiologiae Plantarum, 2019, 41(9): 1−11. [5] 刘梦雨, 蒋梦琦, 陈燕, 等. 龙眼GDSL酯酶/脂肪酶基因的全基因组鉴定及表达分析 [J]. 园艺学报, 2022, 49(3):597−612. doi: 10.16420/j.issn.0513-353x.2020-0942LIU M Y, JIANG M Q, CHEN Y, et al. Genome-wide identification and expression analysis of GDSL esterase/lipase genes in Dimocarpus longan [J]. Acta Horticulturae Sinica, 2022, 49(3): 597−612.(in Chinese) doi: 10.16420/j.issn.0513-353x.2020-0942 [6] 田娜, 刘范, 伍俊为, 等. 香蕉GRF基因家族的全基因组鉴定及表达分析 [J]. 果树学报, 2020, 37(12):1821−1835. doi: 10.13925/j.cnki.gsxb.20200226TIAN N, LIU F, WU J W, et al. Genome-wide identification and expression analysis of GRF gene family in banana [J]. Journal of Fruit Science, 2020, 37(12): 1821−1835.(in Chinese) doi: 10.13925/j.cnki.gsxb.20200226 [7] LING H. Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana [J]. Pakistan Journal of Biological Sciences:PJBS, 2008, 11(5): 763−767. doi: 10.3923/pjbs.2008.763.767 [8] CHEPYSHKO H, LAI C P, HUANG L M, et al. Multifunctionality and diversity of GDSL esterase/lipase gene family in rice (Oryza sativa L. japonica) genome: New insights from bioinformatics analysis [J]. BMC Genomics, 2012, 13: 309. doi: 10.1186/1471-2164-13-309 [9] REN R S, YANG X P, XU J H, et al. Genome-wide identification and analysis of GDSL-type esterases/lipases in watermelon (Citrullus lanatus) [J]. Scientia Horticulturae, 2021, 289: 110461. doi: 10.1016/j.scienta.2021.110461 [10] VOLOKITA M, ROSILIO-BRAMI T, RIVKIN N, et al. Combining comparative sequence and genomic data to ascertain phylogenetic relationships and explore the evolution of the large GDSL-lipase family in land plants [J]. Molecular Biology and Evolution, 2010, 28(1): 551−565. [11] UPDEGRAFF E P, ZHAO F, PREUSS D. The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen [J]. Sexual Plant Reproduction, 2009, 22(3): 197−204. doi: 10.1007/s00497-009-0104-5 [12] HUANG L M, LAI C P, CHEN L F O, et al. Arabidopsis SFAR4 is a novel GDSL-type esterase involved in fatty acid degradation and glucose tolerance [J]. Botanical Studies, 2015, 56(1): 33. doi: 10.1186/s40529-015-0114-6 [13] WELTI R, LI W Q, LI M Y, et al. Profiling membrane lipids in plant stress responses. Role of phospholipase D alpha in freezing-induced lipid changes in Arabidopsis [J]. The Journal of Biological Chemistry, 2002, 277(35): 31994−32002. doi: 10.1074/jbc.M205375200 [14] HONG J K, CHOI H W, HWANG I S, et al. Function of a novel GDSL-type pepper lipase gene, CaGLIP1, in disease susceptibility and abiotic stress tolerance [J]. Planta, 2008, 227(3): 539−558. doi: 10.1007/s00425-007-0637-5 [15] GAO M J, YIN X, YANG W B, et al. GDSL lipases modulate immunity through lipid homeostasis in rice [J]. PLoS Pathogens, 2017, 13(11): e1006724. doi: 10.1371/journal.ppat.1006724 [16] MAYFIELD J A, FIEBIG A, JOHNSTONE S E, et al. Gene families from the Arabidopsis thaliana pollen coat proteome [J]. Science, 2001, 292(5526): 2482−2485. doi: 10.1126/science.1060972 [17] OH I S, PARK A R, BAE M S, et al. Secretome analysis reveals an Arabidopsis lipase involved in defense against Alternaria brassicicola [J]. The Plant Cell, 2005, 17(10): 2832−2847. doi: 10.1105/tpc.105.034819 [18] CLAU K, BAUMERT A, NIMTZ M, et al. Role of a GDSL lipase-like protein as sinapine esterase in Brassicaceae [J]. The Plant Journal, 2008, 53(5): 802−813. doi: 10.1111/j.1365-313X.2007.03374.x [19] NARANJO M A, FORMENT J, ROLDÁN M, et al. Overexpression of Arabidopsis thaliana LTL1, a salt-induced gene encoding a GDSL-motif lipase, increases salt tolerance in yeast and transgenic plants [J]. Plant, Cell & Environment, 2006, 29(10): 1890−1900. [20] D’HONT A, DENOEUD F, AURY J M, et al. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants [J]. Nature, 2012, 488(7410): 213−217. doi: 10.1038/nature11241 [21] 刘范, 田娜, 孙雪丽, 等. 香蕉GLP基因家族全基因组鉴定及表达分析 [J]. 园艺学报, 2020, 47(10):1930−1946. doi: 10.16420/j.issn.0513-353x.2019-0983LIU F, TIAN N, SUN X L, et al. Genome-wide identification and expression analysis of banana GLP gene family [J]. Acta Horticulturae Sinica, 2020, 47(10): 1930−1946.(in Chinese) doi: 10.16420/j.issn.0513-353x.2019-0983 [22] CHEN C J, CHEN H, ZHANG Y, et al. TBtools: An integrative toolkit developed for interactive analyses of big biological data [J]. Molecular Plant, 2020, 13(8): 1194−1202. doi: 10.1016/j.molp.2020.06.009 [23] TAKAHASHI K, SHIMADA T, KONDO M, et al. Ectopic expression of an esterase, which is a candidate for the unidentified plant cutinase, causes cuticular defects in Arabidopsis thaliana [J]. Plant and Cell Physiology, 2010, 51(1): 123−131. doi: 10.1093/pcp/pcp173 [24] LING H, ZHAO J Y, ZUO K J, et al. Isolation and expression analysis of a GDSL-like lipase gene from Brassica napus L [J]. Journal of Biochemistry and Molecular Biology, 2006, 39(3): 297−303. [25] CANNON S B, MITRA A, BAUMGARTEN A, et al. The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana [J]. BMC Plant Biology, 2004, 4: 10. doi: 10.1186/1471-2229-4-10 [26] ROY S W, PENNY D. Patterns of intron loss and gain in plants: Intron loss-dominated evolution and genome-wide comparison of O. sativa andA. thaliana [J]. Molecular Biology and Evolution, 2007, 24(1): 171−181. [27] 李田, 孙景宽, 刘京涛. 植物启动子研究进展 [J]. 生物技术通报, 2015, 31(2):18−25. doi: 10.13560/j.cnki.biotech.bull.1985.2015.02.003LI T, SUN J K, LIU J T. Research advances on plant promoter [J]. Biotechnology Bulletin, 2015, 31(2): 18−25.(in Chinese) doi: 10.13560/j.cnki.biotech.bull.1985.2015.02.003 [28] 李君霞, 代书桃, 陈宇翔, 等. MYB转录因子在植物抗旱基因工程中的应用进展 [J]. 河南农业科学, 2020, 49(11):1−9. doi: 10.15933/j.cnki.1004-3268.2020.11.001LI J X, DAI S T, CHEN Y X, et al. Progress on application of MYB transcription factor in plant drought tolerance genetic engineering [J]. Journal of Henan Agricultural Sciences, 2020, 49(11): 1−9.(in Chinese) doi: 10.15933/j.cnki.1004-3268.2020.11.001 [29] ROMBOLÁ-CALDENTEY B, RUEDA-ROMERO P, IGLESIAS-FERNÁNDEZ R, et al. Arabidopsis DELLA and two HD-ZIP transcription factors regulate GA signaling in the epidermis through the L1 box cis-element [J]. The Plant Cell, 2014, 26(7): 2905−2919. doi: 10.1105/tpc.114.127647 [30] CHEN M X, DU X, ZHU Y, et al. Seed fatty acid reducer acts downstream of gibberellin signalling pathway to lower seed fatty acid storage in Arabidopsis [J]. Plant, Cell & Environment, 2012, 35(12): 2155−2169. [31] RIEMANN M, GUTJAHR C, KORTE A, et al. GER1, a GDSL motif-encoding gene from rice is a novel early light- and jasmonate-induced gene [J]. Plant Biology (Stuttgart, Germany), 2007, 9(1): 32−40. doi: 10.1055/s-2006-924561 [32] AKOH C C, LEE G C, LIAW Y C, et al. GDSL family of serine esterases/lipases [J]. Progress in Lipid Research, 2004, 43(6): 534−552. doi: 10.1016/j.plipres.2004.09.002