Soil Microbial Community Affected by Treatments on Soybean Plants Grown at Tea Plantations
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摘要:
目的 探明大豆不同部位处理对茶树土壤细菌和真菌的群落结构及多样性的影响。 方法 采用MiSeq高通量测序方法,分析USB(种植大豆,移除大豆地上部枝叶、只保留根系于土壤中)、ASB(未种植大豆,将USB处理的大豆地上部割下覆盖到土壤表面)、WSB(种植大豆,保留大豆根系并将大豆上部割下就地覆盖土壤表面)3种处理方式对茶树根际土壤细菌和真菌群落多样性、组间差异性和相关性。 结果 相对CK组,ASB、USB和WSB三组茶园土壤细菌的OTU数量、ACE指数和Chao1指数显著提高(P<0.05);ASB和WSB组中真菌的OTU数量显著提高,3组真菌的ACE指数显著提高。Bray聚类和三元相位图表明,3组处理组土壤细菌和真菌的群落结构相似性高;优势细菌为鞘鞍醇单胞菌属(Sphingomonas,7.53%),与Bryobacter菌属互为正相关性;而相对于CK,真菌群落相对丰度产生明显的差异,其中优势菌种阿尼菌属 (Arnium, 7.21%)只存在于3个处理组,并与青霉菌属(Penicillium)呈现出负相关性;Condenascus的相对丰度也明显提高。 结论 大豆不同部位处理提高了茶园土壤微生物群落多样性、增加有益微生物种类,其中WSB组中有益的微生物富集作用更为显著。 Abstract:Objective Effects of different treatments of soybean plants on the microbial community in tea plantation soil were studied. Method MiSeq high-throughput sequencing method was employed to analyze the differentiations on the microbial structure and diversity in rhizosphere soils at tea plantations with or without soybeans plants grown on the land and the use of cut plant parts. The treatments applied for the study were USB (removing aboveground parts of planted soybean plants), ASB (ground-mulching with cut plant parts from USB treatment), and WSB (covering soybean growing ground with cut aboveground plant parts). Result The rhizosphere soil of the treatment fields had significantly higher OTU, ACE index, and Chao1 index than that of no-treatment CK (P<0.05). ASB or WSB significantly increased the fungal OTU, while all 3 treatments significantly raised the fungal ACE index. The Bray clustering and ternary phase plots on the 3 treatments showed a similarity on soil bacterial and fungal structures that had Sphingomonas being the dominant bacteria at 7.53% and positively correlated with Bryobacter. The relative abundance of the fungal communities, on the other hand, significantly differed from that of CK as the dominant species Arnium at 7.21% found only in the treatment soils which was negatively correlated with Penicillium. In addition, the abundance of Condenascus increased significantly. Conclusion The various treatments on the soybean plants at the tea plantations altered the soil microbial community. They increased the diversity and abundance of microbes, especially, WSB significantly enriched the microbial population in in the rhizosphere soil. -
Key words:
- Soybean /
- tea plantation soil /
- community microbial structure /
- diversity /
- intergroup variability
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图 3 3个不同处理的OTU和门水平微生物分布的三元图
①A:组间的细菌菌种差异;B: 组间的真菌菌种差异;②三角形的3个角分别代表3个样品,3个样品分别用3个颜色表示,三条边用于度量相应颜色的样品的物种丰度,三角图中的圆圈代表某一门水平下包含的所有种水平的物种分类,圆圈大小代表物种的平均相对丰度。
Figure 3. Ternary plot of OTU and phylum-level microbial distribution in soils under treatments
①A: different bacterial strains among groups; B: different fungal strains among groups; ②3 corners in a triangle represent 3 different samples in different colors, and 3 sides signify species abundance in samples of corresponding color. Circle inside a triangle represents species classification of all species at a specified level, and size of circle signifies average relative abundance of species.
图 4 不同处理后对微生物的属水平相关性分析
A:细菌属水平相关性;B: 真菌属水平相关性;圆圈代表物种,圆圈大小代表物种平均丰度大小;线条代表两物种间相关,线的粗细代表相关性的强弱;线的颜色:橙色代表正相关,绿色代表负相关。
Figure 4. Correlation among microbes in soil at genus level after treatments.
A: among bacteria; B: among fungi;Circle represents species and its size average abundance; line, correlation between two species and its thickness strength of correlation; orange-colored line, positive correlation; and green-colored line, negative correlation.
表 1 不同处理后茶园土壤微生物Alpha多样性指数
Table 1. Indices of alpha microbial diversities of tea plantation soils with different treatments on soybean plants
类别
Category处理
TreatmentOTU数量
OTU countsACE指数
ACE indexChao1指数
Chao1 index辛普森多样性指数
Simpson index香农多样性指数
Shannon index细菌 Bacterium CK 985.67±132.90 b 1042.00±97.63 b 1055.43±95.03 b 0.01±0.00 a 5.71±0.18 a ASB 1247.50±21.36 a 1296.88±11.65 a 1305.34±14.97 a 0.02±0.01 a 5.58±0.23 a USB 1178.50±47.18 a 1231.65±39.31 a 1242.85±39.17 a 0.11±0.10 a 5.02±0.66 a WSB 1233.67±22.00 a 1322.35±14.42 a 1326.90±14.39 a 0.02±0.00 a 5.50±0.12 a 真菌 Fungus CK 170.67±32.52 c 185.41±40.11 b 176.25±35.13 a 0.07±0.04 a 3.61±0.43 a ASB 221.33±14.94 ab 279.63±13.94 a 251.77±13.57 a 0.06±0.01 a 3.77±0.12 a USB 180.83±10.70 bc 281.73±29.52 a 256.58±37.65 a 0.09±0.02 a 3.41±0.18 a WSB 241.33±10.56 a 263.26±9.65 a 262.41±11.21 a 0.10±0.03 a 3.40±0.18 a 数据表示重复组的平均值±标准误差。不同字母表示组间差异显著(P <0.05).
Data represent mean ± standard error of replicates. Different letters indicate significant difference between the treatments (P< 0.05). -
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